Gitlab will be upgraded from version 14.2 to 14.4 Wednesday evening (20211027). Release notes can be found here (we run the Core release): https://about.gitlab.com/releases/2021/10/22/gitlab-14-4-released/

C

cov2_ref

Download cov2 (WuHan1 strain) fasta and gff3 from NCBI, and index with BWA, STAR, etc.