Commit 65d5ed5b authored by Brent Womble's avatar Brent Womble
Browse files

2 hours wasn't enough time for the majority of HCP subjects. Changed partition...

2 hours wasn't enough time for the majority of HCP subjects. Changed partition type and increased time limit to 12 hours
parent 23b8e153
#!/bin/bash #!/bin/bash
jobs=/data/scratch/kecannon/brainhack2018/jobs2_HCP jobs=/data/scratch/kecannon/brainhack2018/jobs3_HCP
sub_dir=/data/scratch/kecannon/brainhack2018/HCP sub_dir=/data/scratch/kecannon/brainhack2018/HCP
mkdir $jobs mkdir $jobs
...@@ -24,7 +24,7 @@ do ...@@ -24,7 +24,7 @@ do
#Submit jobs #Submit jobs
pushd $jobs pushd $jobs
echo "submitting segment job for $sub" echo "submitting segment job for $sub"
sbatch --job-name=segment_$sub --output=segment_$sub.txt --ntasks=1 --partition=express --mem-per-cpu=9192 --time=2:00:00 segment_$sub.sh sbatch --job-name=segment_$sub --output=segment_$sub.txt --ntasks=1 --partition=short --mem-per-cpu=9192 --time=12:00:00 segment_$sub.sh
popd popd
done done
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