Commit a8d1da31 authored by Lara Ianov's avatar Lara Ianov
Browse files

fix readme to refer to Bioc. image as parent image

parent 72909d1f
......@@ -31,7 +31,7 @@ Thus, if you have package dependencies from Bioconductor, it's highly recommende
__NOTE__: As mentioned above, Biconductor containers are released based on Bioconducor releases (`bioconductor/bioconductor_docker:RELEASE_X_Y`), keeping in mind that each bioconductor release is linked to specific R versions. Thus, when choosing a container repository, use the following release history to track down R versions compatible with the Bioconductor releases: https://www.bioconductor.org/about/release-announcements/
The following defines the Dockerfile with Bioconductor release 3.10 (linked to R version 3.6), along with installations (with `BiocManager::install`) for Bioconductor packages `DESeq2` and `pasilla`. I am also adding a few CRAN packages via the standard R install function `install.packages` to simply demonstrate that you can still install any non-bioconductor dependencies in the same form you would normally do without using the Bioconductor base image.
The following defines the Dockerfile with Bioconductor release 3.10 (linked to R version 3.6), along with installations (with `BiocManager::install`) for Bioconductor packages `DESeq2` and `pasilla`. I am also adding a few CRAN packages via the standard R install function `install.packages` to simply demonstrate that you can still install any non-bioconductor dependencies in the same form you would normally do without using the Bioconductor parent image.
```docker
FROM bioconductor/bioconductor_docker:RELEASE_3_10
......
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