Commit 5f0e7f81 authored by Robert Phillips's avatar Robert Phillips
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parent 0d955477
module load SAMtools
cd /data/user/rphill3/Enhancer_Ident_ATAC
samtools merge Cor_ATAC_merged.bam ATAC_K2_S1.bam ATAC_K3_S2.bam ATAC_K4_S3.bam ATAC_V1_S4.bam ATAC_V2_S5.bam ATAC_V3_S6.bam
samtools sort Cor_ATAC_merged.bam -o Cor_ATAC_merged.sorted.bam
samtools index Cor_ATAC_merged.sorted.bam Cor_ATAC_merged.sorted.bam.bai
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