Commit a51de896 authored by Robert Phillips's avatar Robert Phillips
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Update README.md

parent 76bf7eb3
......@@ -10,7 +10,7 @@ The diagram below outlines a general workflow for the identifcation of enhancers
```mermaid
graph TD;
A[1. For each brain region separately, merge BAM files with SAMtools] --> B[2. For each brain region separately, call peaks with MACS2];
A[1. For each brain region separately, merge BAM files with SAMtools] --> B[2. For each brain region separately, Call peaks with MACS2];
B --> C[3. For each brain region separately, merge peaks within 1kb using bedtools];
C --> D[4. For each brain region separately, remove any peaks smaller than 146 bp or the legnth of DNA wrapped around a nucleosome];
D --> E[5. Combine all peaks with rbind in R. These peaks are the Regions of Open Chromatin or ROCs];
......
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