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PE Fastq QC, then de novo assembly with Spades. Intended for viral and bacterial genomics

UAB Research Computing Node Health Check (NHC) configuration files and scripts. The upstream Node Health Check project contains the NHC code.

A mediawiki graphic theme for UAB using the vector skin. Compatible with mediawiki-1.19 (maybe later) with a few visual glitches on tab support. Compatibility with current releases needs to be confirmed.

Uses OpenAI API to determine if a research idea is reasonable and novel for the MPOG database. Not affiliated with MPOG in any way.

While working with XDMOD we observed that the slurm job table was missing id_assoc data for some entries. Due to this sacct was not able to get user-name and account-name. This was leading to XDMOD putting some jobs under unknown users.

A collection of utilities for manipulating data and calculating inter-annotator agreement in brat annotation files.

🦆🦆 Quality Control of NGS samples 🦆🦆