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A collection of utilities for manipulating data and calculating inter-annotator agreement in brat annotation files.

Short code to do some simple indexing of UMLS.

This tutorial allows user to run parallelism using bash scripts and array jobs. Also it contains parallel scripts for matlab and R

🦆🦆 Quality Control of NGS samples 🦆🦆

In preparation for the data movement, to install Parsync and test on our dev platform.

PE Fastq QC, then de novo assembly with Spades. Intended for viral and bacterial genomics

UAB Research Computing Node Health Check (NHC) configuration files and scripts. The upstream Node Health Check project contains the NHC code.

Get minikube installed and run a stateful set with mysql and wordpress