Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in / Register
Toggle navigation
Menu
Open sidebar
John-Paul Robinson
createAndParseSACCT
Commits
e0a20660
Commit
e0a20660
authored
Mar 19, 2020
by
Saisri Vegesna
Browse files
Update README.md
parent
9bfe805f
Changes
1
Hide whitespace changes
Inline
Side-by-side
README.md
View file @
e0a20660
...
...
@@ -8,6 +8,11 @@ Now load the Anaconda module and create environment on Cheaha cluster:
$module load Anaconda3
$conda env create -f environment-slurm-ds.yml
```
If we have to create a database from sacct
```
directoryToUse="/data/user/$USER/VariousNeurology/user/"
sacct -P -u $USER --starttime=2019-01-01 --format user,start,jobid,jobname,state,partition,maxrss,reqmem,reqcpus,node,nnodes,elapsed >> "$directoryToUse"userusage.db
```
# Check to see if the environment works
After the environment is created, you can start up an interactive Jupyter notebook session through rc.uab.edu to check if the environment works.
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment