Adding a script for rc-build user to build softwares through an input file

bin/build_software_rc-build_user

+# This script builds the softwares listed in ebinput.txt by
+# creating a slurm script for it's build using EasyBuild.
+# This also creates a general directory structure for the project
+
+
+#!/bin/bash
+
+cd ../..
+for software in `cat $1`
+do
+mkdir `echo "$software" | awk -F'-' '{print $1}'`
+cd `echo "$software" | awk -F'-' '{print $1}'`
+cat > build-$software.job <<EOF
+#!/bin/bash
+#SBATCH --share
+#SBATCH --partition=medium
+#SBATCH --job-name=build-`echo "$software" | awk -F'-' '{print $1}'`
+#SBATCH --output=out.txt
+#SBATCH --error=`echo "$software" | awk -F'-' '{print $1}'`.err
+#SBATCH --ntasks=4
+#SBATCH --time=08:00:00
+#SBATCH --mem-per-cpu=1024
+#SBATCH --mail-type=END
+#SBATCH --mail-type=FAIL
+#SBATCH --mail-user=rc-build@vo.uabgrid.uab.edu
+
+eb $software -r >> `echo "$software" | awk -F'-' '{print $1}'`.out
+EOF
+
+sbatch build-$software.job
+cd ..
+done