Commit f75c055f authored by Ravi Tripathi's avatar Ravi Tripathi

Modify README file for the project to add steps to start a Jupyter notebook

parent 8ea6237f
......@@ -15,11 +15,22 @@ Copy and paste the following code into the editor window. (Replace all current c
#!/bin/bash
# JOB HEADERS HERE
git clone https://gitlab.rc.uab.edu/rc-training-sessions/singularity_containers.git /data/user/$USER/r-visualizations
git clone https://gitlab.rc.uab.edu/rc-training-sessions/singularity_containers.git /data/user/$USER/singularity_containers
```
# Start Jupyter Notebook
Launch Jupyter Notebook through the interactive apps page in the OnDemand (rc.uab.edu) portal
Launch Jupyter Notebook through the interactive apps page in the OnDemand (rc.uab.edu) portal using following settings:
## Environment Setup:
```
# Load required modules
module load Singularity/2.5.2-GCC-5.4.0-2.26
module load Anaconda3
```
## Extra Jupyter Arguments:
```
--notebook-dir=/data/user/$USER/singularity_containers
```
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