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Created with Raphaël 2.2.01Mar31Jan2011Apr29Jun874228May272611109765420Apr1917161513119863231Mar2624161254325Feb24232219121110Merge branch 'prep_for_archival' into 'master'mastermasteradds repo migration noteMerge branch 'flexible_input_reqts' into 'master'Preps QuaC for public availabilityMerge branch 'qualimap_bamqc-cluster-config' into 'master'1.11.1User configurable hardware resourcesMerge branch 'minor_fixes_1.0' into 'master'1.01.0Accept only-one-sample per project as input to QuaCMerge branch 'qc_under_one_umbrella' into 'master'updates quac-watch threshold for chr6updates quac-watch threshold for chr7removes directory tag as per suggestionupdates changelogapplies cleanenv to singularity - #28supplies uuid from wrapper script - fixes #27makes tmp folder more isolatedcreates instance specific multiqc config -uses uuid - #27updates path in readmeremoves cgds from multiqc configswitches qc-checkup to quac_watch - contdswitches qc-checkup to quac_watch - contdswitches qc-checkup to quac_watch - contdswitches qc-checkup to quac_watch - contdswitches qc-checkup to quac_watchadds qualimap's error rate thresholdupdates multiqc templateupdates variant freq per contig thresholdsupdates readme to reflect exome specific thresholdsadds warningupdates bcftools stats for exomesupdates qualimap thresholds for exomecopies config file for exomerefactors to enable use of exome specific configs fileupdates changelogsets rerun_failed to 1 - #22removes panoptes monitoring - #23workflow config uses resource files in manual_datasets_centralupgrades somalier versionremoves outdated commentApply 1 suggestion(s) to 1 file(s)