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Two sample lists

samples to be processed from raw, internally additional samples already pre-processed from an external source

Building out HPC images and deploying on OpenStack

Building and deploying generic virtual machine

Download cov2 (WuHan1 strain) fasta and gff3 from NCBI, and index with BWA, STAR, etc.

Creating a ceph dev environment to work with a simple cluster. This is a build of ceph-dev.

https://docs.ceph.com/en/reef/dev/quick_guide/

This tutorial allows user to run parallelism using bash scripts and array jobs. Also it contains parallel scripts for matlab and R