Commits · f7ddc28e72bc6ce9a6020e11e190de7c8d1d94fb · center-for-computational-genomics-and-data-science / public / QuaC · GitLab

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Apr 11, 2021
- adds protected tags - #9 · f7ddc28e
  Manavalan Gajapathy authored 3 years ago
  
  f7ddc28e
Apr 08, 2021
- bugfix: fixes "units" when aggregating multi-sample qc · e7f36802
  Manavalan Gajapathy authored 3 years ago
  
  e7f36802
- goes back to older dir structure setup for rename-config · aef2903b
  Manavalan Gajapathy authored 3 years ago
  
  aef2903b
Apr 06, 2021
- refactors expand · c23f4d68
  Manavalan Gajapathy authored 3 years ago
  
  c23f4d68
- formats by snakefmt · 4fa89fef
  Manavalan Gajapathy authored 3 years ago
  
  4fa89fef
- moves rename config dirpath · 684605d8
  Manavalan Gajapathy authored 3 years ago
  
  684605d8
Apr 02, 2021
- bye bye todo · 93f0c4f2
  Manavalan Gajapathy authored 3 years ago
  
  93f0c4f2
- turns off rules.input chaining as it bugs out · e2fdd985
  Manavalan Gajapathy authored 3 years ago
  
  e2fdd985
- determines "units" - closes #8 · 2fb54612
  Manavalan Gajapathy authored 3 years ago
  
  2fb54612
- refactors expand parts for readability · ee22cfff
  Manavalan Gajapathy authored 3 years ago
  
  ee22cfff
- creates multiqc aggregation for all samples in input · 0cf0bc94
  Manavalan Gajapathy authored 3 years ago
  
  0cf0bc94
- aggregates rename-configs of all samples · a4cdc4da
  Manavalan Gajapathy authored 3 years ago
  
  a4cdc4da
- removes somalier from sample-level multiqc · 4369a0fe
  Manavalan Gajapathy authored 3 years ago
  
  4369a0fe
- adds qc-checkup and multiqc final pass steps · 6e7639c1
  Manavalan Gajapathy authored 3 years ago
  
  6e7639c1
- adds dedup file to multiqc input · 0c37cf39
  Manavalan Gajapathy authored 3 years ago
  
  0c37cf39
- supplies custom param to multiqc · 7de5ea81
  Manavalan Gajapathy authored 3 years ago
  
  7de5ea81
- copies multiqc config file from small var pipeline · 179b8fe0
  Manavalan Gajapathy authored 3 years ago
  
  179b8fe0
- refactors variables to include "analysis" to path at higher level · 4a2cdf9a
  Manavalan Gajapathy authored 3 years ago
  
  4a2cdf9a
Mar 31, 2021
- adds preliminary multiqc-initial-pass · c9409009
  Manavalan Gajapathy authored 3 years ago
  
  c9409009
Mar 12, 2021
- lints using snakefmt · 31bdea3f
  Manavalan Gajapathy authored 4 years ago
  
  31bdea3f
Mar 05, 2021
- cleans up multiqc rule · d5955f51
  Manavalan Gajapathy authored 4 years ago
  
  d5955f51
- now quacs multiqc · 1093aff1
  Manavalan Gajapathy authored 4 years ago
  
  1093aff1